The iron-sulfur helicase DDX11 promotes the generation of single-stranded DNA for CHK1 activation

Life Sci Alliance. 2020 Feb 18;3(3):e201900547. doi: 10.26508/lsa.201900547. Print 2020 Mar.

Abstract

The iron-sulfur (FeS) cluster helicase DDX11 is associated with a human disorder termed Warsaw Breakage Syndrome. Interestingly, one disease-associated mutation affects the highly conserved arginine-263 in the FeS cluster-binding motif. Here, we demonstrate that the FeS cluster in DDX11 is required for DNA binding, ATP hydrolysis, and DNA helicase activity, and that arginine-263 affects FeS cluster binding, most likely because of its positive charge. We further show that DDX11 interacts with the replication factors DNA polymerase delta and WDHD1. In vitro, DDX11 can remove DNA obstacles ahead of Pol δ in an ATPase- and FeS domain-dependent manner, and hence generate single-stranded DNA. Accordingly, depletion of DDX11 causes reduced levels of single-stranded DNA, a reduction of chromatin-bound replication protein A, and impaired CHK1 phosphorylation at serine-345. Taken together, we propose that DDX11 plays a role in dismantling secondary structures during DNA replication, thereby promoting CHK1 activation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphatases / genetics
  • Animals
  • Cell Cycle Proteins / genetics
  • Checkpoint Kinase 1 / genetics
  • Checkpoint Kinase 1 / metabolism*
  • DEAD-box RNA Helicases / genetics*
  • DEAD-box RNA Helicases / metabolism*
  • DNA / chemistry
  • DNA Helicases / genetics*
  • DNA Helicases / metabolism*
  • DNA Polymerase III / chemistry
  • DNA Polymerase III / genetics
  • DNA Replication
  • DNA, Single-Stranded / biosynthesis*
  • DNA, Single-Stranded / genetics
  • DNA, Single-Stranded / metabolism
  • DNA-Binding Proteins / metabolism
  • Humans
  • Replication Protein A / metabolism
  • Sf9 Cells

Substances

  • Cell Cycle Proteins
  • DNA, Single-Stranded
  • DNA-Binding Proteins
  • RPA1 protein, human
  • Replication Protein A
  • WDHD1 protein, human
  • DNA
  • CHEK1 protein, human
  • Checkpoint Kinase 1
  • DNA Polymerase III
  • Adenosine Triphosphatases
  • DNA Helicases
  • DDX11 protein, human
  • DEAD-box RNA Helicases