A spectroscopic and computational intervention of interaction of lysozyme with 6-mercaptopurine

Anal Bioanal Chem. 2020 Apr;412(11):2565-2577. doi: 10.1007/s00216-020-02483-1. Epub 2020 Feb 13.

Abstract

In the present work, biophysical insight into the binding interactions of the protein, hen egg white (HEW) lysozyme (Lyz) with an anticancer drug, 6-mercaptopurine (6-MP)' was investigated by using a combination of spectroscopic and computational tools. 6-MP, a synthetic analog of natural purines, is a well-known anticancer drug and antiviral agent that inhibits the synthesis of RNA, DNA, and proteins. Lysozyme is a single-chain protein that can combine with endogenous and exogenous substances to exert its antiviral, antibacterial, and antitumor effects. The intrinsic fluorescence of lysozyme was quenched with the increased addition of 6-MP. The quenching mechanism was found to be static in nature as shown by the fluorescence lifetime and excitation spectrum measurements. The conformational changes of Lyz in the presence of 6-MP were monitored both at the ensemble and single-molecule level by using synchronous fluorescence spectroscopy, circular dichroism (CD), and fluorescence correlation spectroscopy (FCS). Molecular docking results predicted the probable binding sites for 6-MP on Lyz. The experimental findings are in good agreement with the results obtained by the molecular dynamics (MD) simulation study. Graphical abstract.

Keywords: 6-Mercaptopurine; Circular dichroism; Fluorescence correlation spectroscopy; Fluorescence spectroscopy; Lysozyme; MD simulation.

MeSH terms

  • Animals
  • Antimetabolites, Antineoplastic / metabolism*
  • Chickens
  • Circular Dichroism
  • Mercaptopurine / metabolism*
  • Molecular Docking Simulation
  • Molecular Dynamics Simulation
  • Muramidase / chemistry
  • Muramidase / metabolism*
  • Protein Binding
  • Protein Conformation / drug effects
  • Spectrometry, Fluorescence

Substances

  • Antimetabolites, Antineoplastic
  • Mercaptopurine
  • hen egg lysozyme
  • Muramidase