Re-assessing microbiomes in the low-biomass reproductive niche

BJOG. 2020 Jan;127(2):147-158. doi: 10.1111/1471-0528.15974. Epub 2019 Nov 21.

Abstract

The female reproductive tract represents a continuum between the vagina and the upper genital tract. New evidence from cultivation-independent studies suggests that the female upper genital tract is not sterile; however, the significance of this for reproductive health and disease remains to be elucidated fully. Further, diagnosis and treatment of infectious reproductive tract pathologies using cultivation-independent technologies represents a largely unchartered area of modern medical science. The challenge now is to design well-controlled experiments to account for the ease of contamination known to confound molecular-based studies of low-biomass niches, including the uterus and placenta. This will support robust assessment of the potential function of microorganisms, microbial metabolites, and cell-free bacterial DNA on reproductive function in health and disease. TWEETABLE ABSTRACT: Molecular microbial studies of low-biomass niches require stringent experimental controls to reveal causal relations in reproductive health and disease.

Keywords: Endometrium; fallopian tube; low-biomass; microbiome; placenta; vagina.

Publication types

  • Review

MeSH terms

  • Biomass*
  • Female
  • Gastrointestinal Microbiome / genetics
  • Gastrointestinal Microbiome / immunology
  • Gastrointestinal Microbiome / physiology*
  • Humans
  • Metagenomics
  • Placenta / immunology
  • Placenta / microbiology*
  • Pregnancy
  • RNA, Ribosomal, 16S / genetics
  • Reproductive Health*
  • Reproductive Tract Infections / microbiology*
  • Sequence Analysis, DNA
  • Vagina / immunology
  • Vagina / microbiology*

Substances

  • RNA, Ribosomal, 16S