Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)

Int J Mol Sci. 2018 Dec 10;19(12):3969. doi: 10.3390/ijms19123969.

Abstract

In plants, the HAK (high-affinity K⁺)/KUP (K⁺ uptake)/KT (K⁺ transporter) family represents a large group of potassium transporters that play important roles in plant growth and environmental adaptation. Although HAK/KUP/KT genes have been extensively investigated in many plant species, they remain uncharacterized in wheat, especially those involved in the response to environmental stresses. In this study, 56 wheat HAK/KUP/KT (hereafter called TaHAKs) genes were identified by a genome-wide search using recently released wheat genomic data. Phylogenetic analysis grouped these genes into four clusters (Ι, II, III, IV), containing 22, 19, 7 and 8 genes, respectively. Chromosomal distribution, gene structure, and conserved motif analyses of the 56 TaHAK genes were subsequently performed. In silico RNA-seq data analysis revealed that TaHAKs from clusters II and III are constitutively expressed in various wheat tissues, while most genes from clusters I and IV have very low expression levels in the examined tissues at different developmental stages. qRT-PCR analysis showed that expression levels of TaHAK genes in wheat seedlings were significantly up- or downregulated when seedlings were exposed to K⁺ deficiency, high salinity, or dehydration. Furthermore, we functionally characterized TaHAK1b-2BL and showed that it facilitates K⁺ transport in yeast. Collectively, these results provide valuable information for further functional studies of TaHAKs, and contribute to a better understanding of the molecular basis of wheat development and stress tolerance.

Keywords: HAK/KUP/KT; abiotic stress; gene family; potassium deficiency; wheat (Triticum aestivum L.).

MeSH terms

  • Cation Transport Proteins / genetics*
  • Cation Transport Proteins / metabolism
  • Chromosomes, Plant / genetics
  • Conserved Sequence / genetics
  • Gene Expression Regulation, Plant / drug effects
  • Genes, Plant
  • Genome, Plant*
  • Multigene Family*
  • Nucleotide Motifs / genetics
  • Phylogeny
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Saccharomyces cerevisiae / metabolism
  • Sodium Chloride / pharmacology
  • Stress, Physiological / drug effects
  • Stress, Physiological / genetics
  • Triticum / drug effects
  • Triticum / genetics*
  • Triticum / physiology

Substances

  • Cation Transport Proteins
  • Plant Proteins
  • Sodium Chloride