DNP NMR of biomolecular assemblies

J Struct Biol. 2019 Apr 1;206(1):90-98. doi: 10.1016/j.jsb.2018.09.011. Epub 2018 Sep 29.

Abstract

Dynamic Nuclear Polarization (DNP) is an effective approach to alleviate the inherently low sensitivity of solid-state NMR (ssNMR) under magic angle spinning (MAS) towards large-sized multi-domain complexes and assemblies. DNP relies on a polarization transfer at cryogenic temperatures from unpaired electrons to adjacent nuclei upon continuous microwave irradiation. This is usually made possible via the addition in the sample of a polarizing agent. The first pioneering experiments on biomolecular assemblies were reported in the early 2000s on bacteriophages and membrane proteins. Since then, DNP has experienced tremendous advances, with the development of extremely efficient polarizing agents or with the introduction of new microwaves sources, suitable for NMR experiments at very high magnetic fields (currently up to 900 MHz). After a brief introduction, several experimental aspects of DNP enhanced NMR spectroscopy applied to biomolecular assemblies are discussed. Recent demonstration experiments of the method on viral capsids, the type III and IV bacterial secretion systems, ribosome and membrane proteins are then described.

Keywords: Biological assemblies; Dynamic nuclear polarization; Magic angle spinning; Protein structure and dynamics; Solid-state NMR.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Capsid Proteins / analysis
  • Capsid Proteins / chemistry*
  • Free Radicals / chemistry
  • Magnetic Resonance Spectroscopy / instrumentation
  • Magnetic Resonance Spectroscopy / methods*
  • Membrane Proteins / analysis
  • Membrane Proteins / chemistry*
  • Microwaves
  • Molecular Structure
  • Nuclear Magnetic Resonance, Biomolecular / instrumentation
  • Nuclear Magnetic Resonance, Biomolecular / methods*
  • Peptides / analysis
  • Peptides / chemistry*
  • Temperature

Substances

  • Capsid Proteins
  • Free Radicals
  • Membrane Proteins
  • Peptides