Rapid diffusion-state switching underlies stable cytoplasmic gradients in the Caenorhabditis elegans zygote

Proc Natl Acad Sci U S A. 2018 Sep 4;115(36):E8440-E8449. doi: 10.1073/pnas.1722162115. Epub 2018 Jul 24.

Abstract

Protein concentration gradients organize cells and tissues and commonly form through diffusion away from a local source of protein. Interestingly, during the asymmetric division of the Caenorhabditis elegans zygote, the RNA-binding proteins MEX-5 and PIE-1 form opposing concentration gradients in the absence of a local source. In this study, we use near-total internal reflection fluorescence (TIRF) imaging and single-particle tracking to characterize the reaction/diffusion dynamics that maintain the MEX-5 and PIE-1 gradients. Our findings suggest that both proteins interconvert between fast-diffusing and slow-diffusing states on timescales that are much shorter (seconds) than the timescale of gradient formation (minutes). The kinetics of diffusion-state switching are strongly polarized along the anterior/posterior (A/P) axis by the PAR polarity system such that fast-diffusing MEX-5 and PIE-1 particles are approximately symmetrically distributed, whereas slow-diffusing particles are highly enriched in the anterior and posterior cytoplasm, respectively. Using mathematical modeling, we show that local differences in the kinetics of diffusion-state switching can rapidly generate stable concentration gradients over a broad range of spatial and temporal scales.

Keywords: C. elegans; MEX-5; PIE-1; gradients; polarity.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Caenorhabditis elegans / cytology
  • Caenorhabditis elegans / genetics
  • Caenorhabditis elegans / metabolism*
  • Caenorhabditis elegans Proteins / genetics
  • Caenorhabditis elegans Proteins / metabolism*
  • Cell Polarity / physiology*
  • Cytoplasm / genetics
  • Cytoplasm / metabolism*
  • Models, Biological*
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Protein Transport / physiology
  • Zygote / cytology
  • Zygote / metabolism*

Substances

  • Caenorhabditis elegans Proteins
  • MEX-5 protein, C elegans
  • Nuclear Proteins
  • pie-1 protein, C elegans