Cloning and DNA sequence of a plasmid-determined citrate utilization system in Escherichia coli

J Bacteriol. 1985 Dec;164(3):983-93. doi: 10.1128/jb.164.3.983-993.1985.

Abstract

The citrate utilization determinant from a large 200-kilobase (kb) naturally occurring plasmid was previously cloned into the PstI site of plasmid vector pBR325 creating the Cit+ tetracycline resistance plasmid pWR61 (15 kb). Tn5 insertion mutagenesis analysis of plasmid pWR61 limited the segment responsible for citrate utilization to a 4.8-kb region bordered by EcoRI and PstI restriction nuclease sites. The 4.8-kb fragment was cloned into phage M13, and the DNA sequence was determined by the dideoxyribonucleotide method. Within this sequence was a 1,296-base-pair open reading frame with a preceding ribosomal binding site. The 431-amino-acid polypeptide that could be translated from this open reading frame would be highly hydrophobic. A second long open reading frame with the potential of encoding a 379-amino-acid polypeptide preceded the larger open reading frame. Portions of the 4.8-kb fragment were further subcloned with restriction endonucleases BglII and BamHI, reducing the minimum size needed for a citrate-positive phenotype to a 1.9-kb BamHI-BglII fragment (which includes the coding region for the 431-amino-acid polypeptide, but only the distal 2/3 of the reading frame for the 379-amino-acid polypeptide). Citrate utilization results from a citrate transport activity encoded by the plasmid. With the 4.8-kb fragment (as with larger fragments) the citrate transport activity was inducible by growth on citrate. On transfer from glucose, succinate, malate, or glycerol medium to citrate medium, the Cit+ Escherichia coli strains showed a delay of 36 to 48 h before growth.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins*
  • Base Sequence
  • Biological Transport, Active
  • Citrates / metabolism*
  • Citric Acid
  • Cloning, Molecular*
  • DNA Restriction Enzymes / metabolism
  • DNA Transposable Elements
  • DNA, Bacterial / analysis
  • Deoxyribonuclease BamHI
  • Deoxyribonucleases, Type II Site-Specific*
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Molecular Weight
  • Mutation
  • Plasmids*

Substances

  • Bacterial Proteins
  • Citrates
  • DNA Transposable Elements
  • DNA, Bacterial
  • Citric Acid
  • DNA Restriction Enzymes
  • Deoxyribonuclease BamHI
  • BglII endonuclease
  • CTGCAG-specific type II deoxyribonucleases
  • Deoxyribonucleases, Type II Site-Specific

Associated data

  • GENBANK/M11559