INO80 Chromatin Remodeling Coordinates Metabolic Homeostasis with Cell Division

Cell Rep. 2018 Jan 16;22(3):611-623. doi: 10.1016/j.celrep.2017.12.079.

Abstract

Adaptive survival requires the coordination of nutrient availability with expenditure of cellular resources. For example, in nutrient-limited environments, 50% of all S. cerevisiae genes synchronize and exhibit periodic bursts of expression in coordination with respiration and cell division in the yeast metabolic cycle (YMC). Despite the importance of metabolic and proliferative synchrony, the majority of YMC regulators are currently unknown. Here, we demonstrate that the INO80 chromatin-remodeling complex is required to coordinate respiration and cell division with periodic gene expression. Specifically, INO80 mutants have severe defects in oxygen consumption and promiscuous cell division that is no longer coupled with metabolic status. In mutant cells, chromatin accessibility of periodic genes, including TORC1-responsive genes, is relatively static, concomitant with severely attenuated gene expression. Collectively, these results reveal that the INO80 complex mediates metabolic signaling to chromatin to restrict proliferation to metabolically optimal states.

Keywords: Abf1; Arp5; INO80; Msn2/4; Reb1; TORC1; cell division; chromatin; metabolism; yeast metabolic cycle.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • ATPases Associated with Diverse Cellular Activities
  • Cell Division / genetics*
  • Chromatin / genetics*
  • Chromatin Assembly and Disassembly / genetics*
  • DNA Helicases / genetics*
  • DNA-Binding Proteins
  • Homeostasis

Substances

  • Chromatin
  • DNA-Binding Proteins
  • ATPases Associated with Diverse Cellular Activities
  • DNA Helicases
  • INO80 protein, human