Calculation of individual cleavage rates from partial digests in restriction endonuclease kinetics

J Theor Biol. 1988 May 7;132(1):7-14. doi: 10.1016/s0022-5193(88)80186-3.

Abstract

A correction for results obtained by an analysis of DNA molecules partially cleaved with restriction endonuclease was suggested. The correction was proved on model data. Applications to (i) electron-microscopic analysis of singly cleaved molecules, (ii) partial digestion of a circular molecule followed by complete digestion with a second enzyme, (iii) systems with great cleavage differences, and (iv) partial cleavage of end-labelled molecules were discussed.

MeSH terms

  • Bacteriophage lambda
  • Binding Sites
  • DNA / metabolism*
  • DNA Restriction Enzymes / metabolism*
  • DNA, Circular / metabolism
  • DNA, Viral / ultrastructure
  • Deoxyribonuclease EcoRI / metabolism
  • Kinetics
  • Microscopy, Electron
  • Models, Biological

Substances

  • DNA, Circular
  • DNA, Viral
  • DNA
  • DNA Restriction Enzymes
  • Deoxyribonuclease EcoRI