A method of HLA class II typing using nonradioactive labelled oligonucleotides

Tissue Antigens. 1989 Apr;33(4):475-85. doi: 10.1111/j.1399-0039.1989.tb01696.x.

Abstract

The typing of HLA class II genes using molecular biology techniques has brought undoubtedly new insights in the analysis of their polymorphism. Particularly interesting is the dot-blot analysis of enzymatically-amplified genomic DNA hybridized with sequence-specific oligonucleotides. In order to use this technique of typing on a routine basis, we established a non-radioactive detection method of enzymatically-amplified genomic DNA dot-blots. We could clearly demonstrate that, using biotin-labelled specific oligonucleotides, it was possible to specifically discriminate between DQB1 first domain DNA sequences displaying three, two or even only one base-pair difference at a given codon position. The very satisfactory sensitivity level reached by this non-radioactive detection method could safely allow its use for clinical applications of HLA typing at the DNA level.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA / genetics
  • Gene Amplification
  • Genetic Markers / analysis
  • HLA-DQ Antigens / genetics
  • Heterozygote
  • Histocompatibility Antigens Class II / genetics*
  • Homozygote
  • Humans
  • Nucleic Acid Hybridization
  • Oligonucleotides / analysis*
  • Sequence Homology, Nucleic Acid

Substances

  • Genetic Markers
  • HLA-DQ Antigens
  • Histocompatibility Antigens Class II
  • Oligonucleotides
  • DNA