Proteolytic bacterial dominance in a full-scale municipal solid waste anaerobic reactor assessed by 454 pyrosequencing technology

Chemosphere. 2016 Mar:146:519-25. doi: 10.1016/j.chemosphere.2015.12.003. Epub 2015 Dec 30.

Abstract

Biomethanization entails a good means to reduce the organic fraction (OF) derived from municipal solid wastes (MSW). The bacterial diversity of a full scale MSW anaerobic reactor located in Madrid (Spain) was investigated using high-throughput 454 pyrosequencing. Even though the proteolytic bacteria prevailed throughout all of the process, community shifts were observed from the start-up to the steady-state conditions, with an increasing biodiversity displayed over time. The Bacteroidetes and the Firmicutes were the majority phyla: 55.1 and 40.2% (start-up) and 18.7 and 78.7 (steady-state) of the total reads. The system's lack of evenness remains noteworthy as the sequences affiliated to the proteolytic non-saccharolytic Proteiniphylum, Gallicola and Fastidiosipila genera, together with the saccharolytic Saccharofermentans, were predominant on the system and this predominance appears to correlate with the presence of a high ammonium concentration. The 454 pyrosequencing revealed a great diversity of rare organisms which seemingly do not sustain any metabolic roles in the course of the OF-MSW degradation. However, this scarce and unique microbiota can confer great resilience to the system as a buffer against nutritional and environmental changing conditions, thus opening the door to increase the current knowledge about the bacterial community dynamics taking place during MSW treatment processes.

Keywords: Bacterial communities; Biomethanization; High-throughput 454 pyrosequencing; Municipal solid wastes; Start-up to steady state conditions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anaerobiosis
  • Bacteroidetes / classification*
  • Bacteroidetes / genetics
  • Bacteroidetes / growth & development*
  • Biodiversity
  • Bioreactors / microbiology*
  • Firmicutes / classification*
  • Firmicutes / genetics
  • Firmicutes / growth & development*
  • High-Throughput Nucleotide Sequencing
  • RNA, Ribosomal, 16S / genetics
  • Refuse Disposal / methods*
  • Sequence Analysis, RNA
  • Spain

Substances

  • RNA, Ribosomal, 16S