Quantitative DNA Methylation Profiling in Cancer

Methods Mol Biol. 2016:1381:75-92. doi: 10.1007/978-1-4939-3204-7_5.

Abstract

Epigenetic mechanisms including DNA methylation are fundamental for the regulation of gene expression. Epigenetic alterations can lead to the development and the evolution of malignant tumors as well as the emergence of phenotypically different cancer cells or metastasis from one single tumor cell. Here we describe bisulfite pyrosequencing, a technology to perform quantitative DNA methylation analyses, to detect aberrant DNA methylation in malignant tumors.

Keywords: Bisulfite pyrosequencing; DNA methylation profiling; Epigenetics.

MeSH terms

  • Base Sequence
  • DNA / analysis
  • DNA / genetics*
  • DNA Fingerprinting / methods*
  • DNA Methylation*
  • Epigenesis, Genetic
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Neoplasms / genetics
  • Sulfites / chemistry

Substances

  • Sulfites
  • DNA
  • hydrogen sulfite