Dysfunctional conformational dynamics of protein kinase A induced by a lethal mutant of phospholamban hinder phosphorylation

Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3716-21. doi: 10.1073/pnas.1502299112. Epub 2015 Mar 9.

Abstract

The dynamic interplay between kinases and substrates is crucial for the formation of catalytically committed complexes that enable phosphoryl transfer. However, a clear understanding on how substrates modulate kinase structural dynamics to control catalytic efficiency is still missing. Here, we used solution NMR spectroscopy to study the conformational dynamics of two complexes of the catalytic subunit of the cAMP-dependent protein kinase A with WT and R14 deletion phospholamban, a lethal human mutant linked to familial dilated cardiomyopathy. Phospholamban is a central regulator of heart muscle contractility, and its phosphorylation by protein kinase A constitutes a primary response to β-adrenergic stimulation. We found that the single deletion of arginine in phospholamban's recognition sequence for the kinase reduces its binding affinity and dramatically reduces phosphorylation kinetics. Structurally, the mutant prevents the enzyme from adopting conformations and motions committed for catalysis, with concomitant reduction in catalytic efficiency. Overall, these results underscore the importance of a well-tuned structural and dynamic interplay between the kinase and its substrates to achieve physiological phosphorylation levels for proper Ca(2+) signaling and normal cardiac function.

Keywords: NMR; calcium regulation; conformational dynamics; phospholamban; phosphorylation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allosteric Site
  • Amino Acid Sequence
  • Calcium / chemistry
  • Calcium-Binding Proteins / chemistry*
  • Calcium-Transporting ATPases / chemistry
  • Cardiomyopathy, Dilated / genetics
  • Catalytic Domain
  • Cyclic AMP-Dependent Protein Kinases / chemistry*
  • Disease Progression
  • Gene Deletion
  • Humans
  • Ligands
  • Magnetic Resonance Spectroscopy
  • Molecular Dynamics Simulation
  • Molecular Sequence Data
  • Mutation*
  • Myocardium / enzymology
  • Phosphorylation
  • Protein Binding
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • Thermodynamics

Substances

  • Calcium-Binding Proteins
  • Ligands
  • phospholamban
  • Cyclic AMP-Dependent Protein Kinases
  • Calcium-Transporting ATPases
  • Calcium

Supplementary concepts

  • Familial dilated cardiomyopathy