Enzymatic synthesis of nucleobase-modified UDP-sugars: scope and limitations

Carbohydr Res. 2015 Mar 2:404:17-25. doi: 10.1016/j.carres.2014.12.005. Epub 2014 Dec 31.

Abstract

Glucose-1-phosphate uridylyltransferase in conjunction with UDP-glucose pyrophosphorylase was found to catalyse the conversion of a range of 5-substituted UTP derivatives into the corresponding UDP-galactose derivatives in poor yield. Notably the 5-iodo derivative was not converted to UDP-sugar. In contrast, UDP-glucose pyrophosphorylase in conjunction with inorganic pyrophosphatase was particularly effective at converting 5-substituted UTP derivatives, including the iodo compound, into a range of gluco-configured 5-substituted UDP-sugar derivatives in good yields. Attempts to effect 4"-epimerization of these 5-substituted UDP-glucose with UDP-glucose 4"-epimerase from yeast were unsuccessful, while use of the corresponding enzyme from Erwinia amylovora resulted in efficient epimerization of only 5-iodo-UDP-Glc, but not the corresponding 5-aryl derivatives, to give 5-iodo-UDP-Gal. Given the established potential for Pd-mediated cross-coupling of 5-iodo-UDP-sugars, this provides convenient access to the galacto-configured 5-substituted-UDP-sugars from gluco-configured substrates and 5-iodo-UTP.

Keywords: Enzymatic synthesis; Epimerase; Modified nucleobase; Pyrophosphatase; Sugar nucleotide.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbohydrate Conformation
  • Diphosphates / chemistry
  • Erwinia amylovora / enzymology
  • Erwinia amylovora / metabolism*
  • Phosphotransferases / metabolism
  • UDPglucose 4-Epimerase / metabolism
  • Uridine Diphosphate Sugars / chemistry*
  • Uridine Diphosphate Sugars / metabolism*

Substances

  • Diphosphates
  • Uridine Diphosphate Sugars
  • diphosphoric acid
  • Phosphotransferases
  • UDPglucose 4-Epimerase