Dense or porous packing? Two-dimensional self-assembly of star-shaped mono-, bi-, and terpyridine derivatives

Chemphyschem. 2015 Apr 7;16(5):949-53. doi: 10.1002/cphc.201402900. Epub 2015 Feb 4.

Abstract

The self-assembly behavior of five star-shaped pyridyl-functionalized 1,3,5-triethynylbenzenes was studied at the interface between an organic solvent and the basal plane of graphite by scanning tunneling microscopy. The mono- and bipyridine derivatives self-assemble in closely packed 2D crystals, whereas the derivative with the more bulky terpyridines crystallizes with porous packing. DFT calculations of a monopyridine derivative on graphene, support the proposed molecular model. The calculations also reveal the formation of hydrogen bonds between the nitrogen atoms and a hydrogen atom of the neighboring central unit, as a small nonzero tunneling current was calculated within this region. The title compounds provide a versatile model system to investigate the role of multivalent steric interactions and hydrogen bonding in molecular monolayers.

Keywords: density functional calculations; graphene; nitrogen heterocycles; scanning probe microscopy; self-assembly.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 2,2'-Dipyridyl / chemistry*
  • Benzene Derivatives / chemistry*
  • Hydrogen Bonding
  • Microscopy, Scanning Tunneling
  • Models, Molecular
  • Porosity
  • Pyridines / chemistry*

Substances

  • Benzene Derivatives
  • Pyridines
  • 2,2'-Dipyridyl
  • 2,2',2''-terpyridine
  • pyridine