Mitochondrial genome of the Luchuan pig (Sus scrofa)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4139-4141. doi: 10.3109/19401736.2014.1003881. Epub 2015 Jan 29.

Abstract

The complete mitochondrial genome sequence of the Luchuan pig was measured by PCR-based methods, primer-walking sequencing, and fragment cloning. The entire mitochondrial genome of the Luchuan pig was identified as a circular molecule consisting of 16,730 bp (GenBank accession number: KP126954). The contents of A, T, C, and G in the mitochondrial genome were found to be 34.65%, 25.80%, 26.19%, and 13.36%, respectively. The complete mitochondrial genome of the Luchuan pig contains a typical structure, including 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and one control region (D-loop region). This complete mitochondrial genome sequence provides essential information in understanding phylogenetic relationships among Sus scrofa domestic mitochondrial genomes.

Keywords: Genome organization; Luchuan pig; mitochondrial genome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition / genetics
  • DNA, Mitochondrial / genetics
  • Genome / genetics
  • Genome, Mitochondrial / genetics*
  • Mitochondria / genetics*
  • Open Reading Frames / genetics
  • Phylogeny
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA / methods
  • Sus scrofa
  • Swine / genetics*

Substances

  • DNA, Mitochondrial
  • RNA, Ribosomal
  • RNA, Transfer