Quantum-chemistry based calibration of the alkali metal cation series (Li(+)-Cs(+)) for large-scale polarizable molecular mechanics/dynamics simulations

J Comput Chem. 2015 Feb 15;36(5):285-302. doi: 10.1002/jcc.23801. Epub 2014 Dec 24.

Abstract

The alkali metal cations in the series Li(+)-Cs(+) act as major partners in a diversity of biological processes and in bioinorganic chemistry. In this article, we present the results of their calibration in the context of the SIBFA polarizable molecular mechanics/dynamics procedure. It relies on quantum-chemistry (QC) energy-decomposition analyses of their monoligated complexes with representative O-, N-, S-, and Se- ligands, performed with the aug-cc-pVTZ(-f) basis set at the Hartree-Fock level. Close agreement with QC is obtained for each individual contribution, even though the calibration involves only a limited set of cation-specific parameters. This agreement is preserved in tests on polyligated complexes with four and six O- ligands, water and formamide, indicating the transferability of the procedure. Preliminary extensions to density functional theory calculations are reported.

Keywords: O, N, S, and Se ligands; alkali metal cations; energy decomposition; polarizable molecular mechanics; quantum chemistry.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cations / chemistry
  • Ligands
  • Metals, Alkali / chemistry*
  • Molecular Dynamics Simulation*
  • Quantum Theory*

Substances

  • Cations
  • Ligands
  • Metals, Alkali