Label-free triple-helix aptamer as sensing platform for "signal-on" fluorescent detection of thrombin

Talanta. 2015 Jan:132:387-91. doi: 10.1016/j.talanta.2014.09.031. Epub 2014 Sep 28.

Abstract

The design of a label-free aptamer for separation of recognition sequence from signal reporter is significant to ensure the high-efficiency affinity between aptamer and target. This work develops a label-free triple-helix aptamer (THA) as sensing platform for "signal-on" fluorescent detection of thrombin. THA was composed of aptamer sequence and help DNA 1 (H1), which contained the complementary sequence of hexachloro-fluorescein (HEX) labeled help DNA 2 (H2). The specific recognition event between aptamer and thrombin triggered the dismission of THA to release H1. The released H1 then reacted with the signal probe of H2/graphene oxide (GO) nanocomposite to form H1-H2 duplex, leading to the fluorescence recovery of H2 due to the detachment of H1-H2 duplex from the surface of GO. With employment of THA as a signal transducer and GO as a "superquencher", this method shows a sensitive response to thrombin with a wide concentration range from 5 to 1200 nM. The limit of detection is 1.8 nM (S/N=3) with excellent selectivity. Considering the universality of THA, the proposed aptasensor would provide a platform for homogeneous fluorescent detection of a wide range of analytes.

Keywords: Triple-helix aptamer; fluorescent detection; graphene oxide; label-free; thrombin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aptamers, Nucleotide / chemical synthesis
  • Aptamers, Nucleotide / chemistry*
  • Fluoresceins / chemistry*
  • Fluorescent Dyes / chemistry*
  • Graphite / chemistry
  • Humans
  • Hydrogen / chemistry
  • Limit of Detection
  • Nucleic Acid Conformation
  • Oxides
  • Spectrometry, Fluorescence
  • Thrombin / analysis*

Substances

  • Aptamers, Nucleotide
  • Fluoresceins
  • Fluorescent Dyes
  • Oxides
  • Graphite
  • Hydrogen
  • Thrombin