Collagen type IV-related nephropathies in Portugal: pathogenic COL4A3 and COL4A4 mutations and clinical characterization of 25 families

Clin Genet. 2015 Nov;88(5):456-61. doi: 10.1111/cge.12521. Epub 2014 Nov 10.

Abstract

Pathogenic mutations in genes COL4A3/COL4A4 are responsible for autosomal Alport syndrome (AS) and thin basement membrane nephropathy (TBMN). We used Sanger sequencing to analyze all exons and splice site regions of COL4A3/COL4A4, in 40 unrelated Portuguese probands with clinical suspicion of AS/TBMN. To assess genotype-phenotype correlations, we compared clinically relevant phenotypes/outcomes between homozygous/compound heterozygous and apparently heterozygous patients. Seventeen novel and four reportedly pathogenic COL4A3/COL4A4 mutations were identified in 62.5% (25/40) of the probands. Regardless of the mutated gene, all patients with ARAS manifested chronic renal failure (CRF) and hearing loss, whereas a minority of the apparently heterozygous patients had CRF or extrarenal symptoms. CRF was diagnosed at a significantly younger age in patients with ARAS. In our families, the occurrence of COL4A3/COL4A4 mutations was higher, while the prevalence of XLAS was lower than expected. Overall, a pathogenic COL4A3/COL4A4/COL4A5 mutation was identified in >50% of patients with fewer than three of the standard diagnostic criteria of AS. With such a population background, simultaneous next-generation sequencing of all three genes may be recommended as the most expedite approach to diagnose collagen IV-related glomerular basement membrane nephropathies.

Keywords: Alport syndrome; COL4A3; COL4A4; COL4A5; thin basement membrane nephropathy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Autoantigens / genetics*
  • Child
  • Child, Preschool
  • Collagen Type IV / genetics*
  • DNA Mutational Analysis
  • Exome
  • Female
  • Genetic Association Studies
  • Hematuria / diagnosis
  • Hematuria / genetics*
  • Hematuria / metabolism
  • Humans
  • Kidney Failure, Chronic / genetics
  • Kidney Failure, Chronic / metabolism
  • Male
  • Middle Aged
  • Mutation*
  • Nephritis, Hereditary / diagnosis
  • Nephritis, Hereditary / genetics*
  • Nephritis, Hereditary / metabolism
  • Portugal
  • Young Adult

Substances

  • Autoantigens
  • COL4A4 protein, human
  • Collagen Type IV
  • type IV collagen alpha3 chain

Supplementary concepts

  • Hematuria, Benign Familial