The structure, function and evolution of proteins that bind DNA and RNA

Nat Rev Mol Cell Biol. 2014 Nov;15(11):749-60. doi: 10.1038/nrm3884. Epub 2014 Oct 1.

Abstract

Proteins that bind both DNA and RNA typify the ability of a single gene product to perform multiple functions. Such DNA- and RNA-binding proteins (DRBPs) have unique functional characteristics that stem from their specific structural features; these developed early in evolution and are widely conserved. Proteins that bind RNA have typically been considered as functionally distinct from proteins that bind DNA and studied independently. This practice is becoming outdated, in partly owing to the discovery of long non-coding RNAs (lncRNAs) that target DNA-binding proteins. Consequently, DRBPs were found to regulate many cellular processes, including transcription, translation, gene silencing, microRNA biogenesis and telomere maintenance.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Binding, Competitive
  • DNA / genetics
  • DNA / metabolism*
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism*
  • Databases, Genetic
  • Evolution, Molecular*
  • Gene Silencing
  • Humans
  • MicroRNAs / genetics
  • MicroRNAs / metabolism
  • Models, Molecular
  • Protein Binding
  • Protein Biosynthesis
  • RNA, Long Noncoding / genetics
  • RNA, Long Noncoding / metabolism*
  • RNA-Binding Proteins / chemistry
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Telomere Homeostasis
  • Transcription, Genetic

Substances

  • DNA-Binding Proteins
  • MicroRNAs
  • RNA, Long Noncoding
  • RNA-Binding Proteins
  • DNA