Crystal and solution structure of the human RIG-I SF2 domain

Acta Crystallogr F Struct Biol Commun. 2014 Aug;70(Pt 8):1027-31. doi: 10.1107/S2053230X14012230. Epub 2014 Jul 23.

Abstract

RIG-I is a pathogen-recognition receptor that recognizes viral 5'-triphosphates carrying double-stranded RNA. Upon binding to these microbe-associated molecular patterns (MAMPs), RIG-I forms oligomers and promotes downstream processes that result in type I interferon production and induction of an antiviral state. Here, the crystal structure of the human RIG-I superfamily 2 ATPase domain crystallized in an unusually elongated and open conformation is reported. The elongated structure is probably induced in part by crystal packing, but nevertheless indicates that the domain is intrinsically very flexible. This flexibility might allow substantial structural changes upon substrate binding and oligomerization.

Keywords: RIG-I; SF2 helicase.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • Chromatography, Gel
  • DEAD Box Protein 58
  • DEAD-box RNA Helicases / chemistry*
  • Humans
  • Light
  • Protein Conformation
  • Receptors, Immunologic
  • Scattering, Radiation

Substances

  • Receptors, Immunologic
  • RIGI protein, human
  • DEAD Box Protein 58
  • DEAD-box RNA Helicases

Associated data

  • PDB/4ON9