Non-coding RNA transcription and RNA-directed DNA methylation in Arabidopsis

Mol Plant. 2014 Sep;7(9):1406-1414. doi: 10.1093/mp/ssu075. Epub 2014 Jun 25.

Abstract

RNA-directed DNA methylation (RdDM) is responsible for transcriptional silencing of endogenous transposable elements and introduced transgenes. This process requires non-coding RNAs produced by DNA-dependent RNA polymerases IV and V (Pol IV and Pol V). Pol IV-produced non-coding RNAs are precursors of 24-nt small interfering RNAs, whereas Pol V-produced ncRNAs directly act as scaffold RNAs. In this review, we summarize recent advances in the understanding of RdDM. In particular, we focus on the mechanisms underlying the recruitment of Pol IV and Pol V to chromatin and the targeting of RdDM.

Keywords: DNA methylation; Pol IV; Pol V; RdDM; siRNA; transcriptional gene silencing..

Publication types

  • Review

MeSH terms

  • Arabidopsis / enzymology
  • Arabidopsis / genetics*
  • Chromatin / genetics
  • Chromatin / metabolism
  • DNA Methylation*
  • DNA-Directed DNA Polymerase / metabolism
  • RNA, Untranslated / genetics*
  • RNA, Untranslated / metabolism*
  • Transcription, Genetic*

Substances

  • Chromatin
  • RNA, Untranslated
  • DNA-Directed DNA Polymerase