Sulfurovum aggregans sp. nov., a hydrogen-oxidizing, thiosulfate-reducing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent chimney, and an emended description of the genus Sulfurovum

Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3195-3201. doi: 10.1099/ijs.0.065094-0. Epub 2014 Jun 25.

Abstract

A novel mesophilic, strictly hydrogen-oxidizing, sulfur-, nitrate- and thiosulfate-reducing bacterium, designated strain Monchim33(T), was isolated from a deep-sea hydrothermal vent chimney at the Central Indian Ridge. The non-motile, rod-shaped cells were Gram-stain-negative and non-sporulating. Growth was observed between 15 and 37 °C (optimum 33 °C; 3.2 h doubling time) and between pH 5.4 and 8.6 (optimum pH 6.0). The isolate was a strictly anaerobic chemolithoautotroph capable of using molecular hydrogen as the sole energy source and carbon dioxide as the sole carbon source. The G+C content of the genomic DNA was 42.6 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the novel isolate belonged to the genus Sulfurovum and was closely related to Sulfurovum sp. NBC37-1 and Sulfurovum lithotrophicum 42BK(T) (95.6 and 95.4 % similarity, respectively). DNA-DNA hybridization demonstrated that the novel isolate could be differentiated genotypically from Sulfurovum sp. NBC37-1 and Sulfurovum lithotrophicum. On the basis of the molecular and physiological traits of the new isolate, the name Sulfurovum aggregans sp. nov. is proposed, with the type strain Monchim33(T) ( = JCM 19824(T) = DSM 27205(T)).

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Chemoautotrophic Growth
  • DNA, Bacterial / genetics
  • Epsilonproteobacteria / classification*
  • Epsilonproteobacteria / genetics
  • Epsilonproteobacteria / isolation & purification
  • Fatty Acids / chemistry
  • Hydrogen / metabolism
  • Hydrothermal Vents / microbiology*
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phospholipids / chemistry
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Sequence Analysis, DNA
  • Thiosulfates / metabolism
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Thiosulfates
  • Vitamin K 2
  • menaquinone 6
  • Hydrogen

Associated data

  • GENBANK/HQ455212
  • GENBANK/HQ587287
  • GENBANK/HQ587518
  • GENBANK/HQ587750
  • GENBANK/HQ587980
  • GENBANK/HQ873179
  • GENBANK/JF308816
  • GENBANK/JN186270
  • GENBANK/JN186287