Latent time-varying factors in longitudinal analysis: a linear mixed hidden Markov model for heart rates

Stat Med. 2014 Oct 15;33(23):4116-34. doi: 10.1002/sim.6220. Epub 2014 Jun 2.

Abstract

Longitudinal data are often segmented by unobserved time-varying factors, which introduce latent heterogeneity at the observation level, in addition to heterogeneity across subjects. We account for this latent structure by a linear mixed hidden Markov model. It integrates subject-specific random effects and Markovian sequences of time-varying effects in the linear predictor. We propose an expectationŰ-maximization algorithm for maximum likelihood estimation, based on data augmentation. It reduces to the iterative maximization of the expected value of a complete likelihood function, derived from an augmented dataset with case weights, alternated with weights updating. In a case study of the Survey on Stress Aging and Health in Russia, the model is exploited to estimate the influence of the observed covariates under unobserved time-varying factors, which affect the cardiovascular activity of each subject during the observation period.

Keywords: EM algorithm; heart rate; hidden Markov model; linear mixed model; longitudinal data.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Age Distribution
  • Aged
  • Aged, 80 and over
  • Aging / physiology*
  • Aging / psychology
  • Biomarkers
  • Comorbidity
  • Female
  • Health Status*
  • Heart Diseases / epidemiology*
  • Heart Rate*
  • Humans
  • Likelihood Functions
  • Linear Models
  • Longitudinal Studies
  • Male
  • Markov Chains
  • Middle Aged
  • Russia / epidemiology
  • Sex Distribution
  • Stress, Psychological / epidemiology
  • Stress, Psychological / physiopathology*
  • Time Factors

Substances

  • Biomarkers