QSAR models for anti-malarial activity of 4-aminoquinolines

Curr Comput Aided Drug Des. 2014 Mar;10(1):75-82. doi: 10.2174/1573409910666140303114621.

Abstract

In the present study, predictive quantitative structure - activity relationship (QSAR) models for anti-malarial activity of 4-aminoquinolines have been developed. CORAL, which is freely available on internet (http://www.insilico.eu/coral), has been used as a tool of QSAR analysis to establish statistically robust QSAR model of anti-malarial activity of 4-aminoquinolines. Six random splits into the visible sub-system of the training and invisible subsystem of validation were examined. Statistical qualities for these splits vary, but in all these cases, statistical quality of prediction for anti-malarial activity was quite good. The optimal SMILES-based descriptor was used to derive the single descriptor based QSAR model for a data set of 112 aminoquinolones. All the splits had r(2)> 0.85 and r(2)> 0.78 for subtraining and validation sets, respectively. The three parametric multilinear regression (MLR) QSAR model has Q(2) = 0.83, R(2) = 0.84 and F = 190.39. The anti-malarial activity has strong correlation with presence/absence of nitrogen and oxygen at a topological distance of six.

MeSH terms

  • Algorithms
  • Aminoquinolines / chemistry*
  • Aminoquinolines / pharmacology*
  • Antimalarials / chemistry*
  • Antimalarials / pharmacology*
  • Artificial Intelligence
  • Drug Design
  • Models, Statistical
  • Quantitative Structure-Activity Relationship
  • Reproducibility of Results

Substances

  • Aminoquinolines
  • Antimalarials