Complete genome sequence of 285P, a novel T7-like polyvalent E. coli bacteriophage

Virus Genes. 2014 Jun;48(3):528-33. doi: 10.1007/s11262-014-1059-7. Epub 2014 Mar 26.

Abstract

Bacteriophages are considered potential biological agents for the control of infectious diseases and environmental disinfection. Here, we describe a novel T7-like polyvalent Escherichia coli bacteriophage, designated "285P," which can lyse several strains of E. coli. The genome, which consists of 39,270 base pairs with a G+C content of 48.73 %, was sequenced and annotated. Forty-three potential open reading frames were identified using bioinformatics tools. Based on whole-genome sequence comparison, phage 285P was identified as a novel strain of subgroup T7. It showed strongest sequence similarity to Kluyvera phage Kvp1. The phylogenetic analyses of both non-structural proteins (endonuclease gp3, amidase gp3.5, DNA primase/helicase gp4, DNA polymerase gp5, and exonuclease gp6) and structural protein (tail fiber protein gp17) led to the identification of 285P as T7-like phage. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis and matrix-assisted laser desorption/ionization time-of-flight mass spectrometric analyses verified the annotation of the structural proteins (major capsid protein gp10a, tail protein gp12, and tail fiber protein gp17).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteriophages / classification
  • Bacteriophages / genetics*
  • Bacteriophages / isolation & purification
  • Base Composition
  • Base Sequence
  • Escherichia coli / virology*
  • Genome, Viral*
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Viral Proteins / genetics

Substances

  • Viral Proteins

Associated data

  • RefSeq/NC_015249