Genotypic polymorphisms of hepatitis B virus provide useful information for estimating geographical origin or place of long-term residence of unidentified cadavers

J Forensic Sci. 2014 Jan;59(1):236-41. doi: 10.1111/1556-4029.12257. Epub 2013 Sep 10.

Abstract

Increasing numbers of unidentified cadavers are a major problem. We have developed a new method for providing identification information that can determine the geographical origin or place of long-term residence of unidentified cadavers based on genotypic polymorphisms of hepatitis B virus (HBV) known to correlate with their geographical distribution. PCR of serum samples detected HBV DNA from 4 (3.9%) of 102 randomly selected Japanese forensic cadavers. Multiplex PCR did not detect multiple HBV genotypes from any single cadaver, confirming the absence of coinfection. Phylogenetic tree analysis based on a 485-bp mutant region of the HBV S gene successfully classified the HBV genotypes into A to J. Among 10 HBV-infected cadavers, 8 had genotype Ce/C2, a genotype prevalent in East Asia, and 2 had genotype Bj/B1, a Japanese-specific genotype. HBV genotypic polymorphisms correlate with the geographical distribution of the virus and thus provide important information for identifying unidentified cadavers infected with HBV.

Keywords: estimating geographical origin; forensic science; genotyping; hepatitis B virus; polymerase chain reaction; unidentified cadaver.

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Asia, Eastern
  • Cadaver
  • Child
  • Child, Preschool
  • DNA, Viral / genetics*
  • Female
  • Genotype*
  • Hepatitis B virus / genetics*
  • Humans
  • Infant
  • Male
  • Middle Aged
  • Multiplex Polymerase Chain Reaction
  • Phylogeny
  • Phylogeography
  • Polymorphism, Genetic*
  • Real-Time Polymerase Chain Reaction
  • Young Adult

Substances

  • DNA, Viral