IκB-ζ controls the constitutive NF-κB target gene network and survival of ABC DLBCL

Blood. 2013 Sep 26;122(13):2242-50. doi: 10.1182/blood-2013-06-508028. Epub 2013 Jul 18.

Abstract

Constitutive activation of the nuclear factor-κ B (NF-κB) pathway is a hallmark of the activated B-cell-like (ABC) subtype of diffuse large B-cell lymphoma (DLBCL). Recurrent mutations of NF-κB regulators that cause constitutive activity of this oncogenic pathway have been identified. However, it remains unclear how specific target genes are regulated. We identified the atypical nuclear IκB protein IκB-ζ to be upregulated in ABC compared with germinal center B-cell-like (GCB) DLBCL primary patient samples. Knockdown of IκB-ζ by RNA interference was toxic to ABC but not to GCB DLBCL cell lines. Gene expression profiling after IκB-ζ knockdown demonstrated a significant downregulation of a large number of known NF-κB target genes, indicating an essential role of IκB-ζ in regulating a specific set of NF-κB target genes. To further investigate how IκB-ζ mediates NF-κB activity, we performed immunoprecipitations and detected a physical interaction of IκB-ζ with both p50 and p52 NF-κB subunits, indicating that IκB-ζ interacts with components of both the canonical and the noncanonical NF-κB pathway in ABC DLBCL. Collectively, our data demonstrate that IκB-ζ is essential for nuclear NF-κB activity in ABC DLBCL, and thus might represent a promising molecular target for future therapies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing
  • Blotting, Western
  • Enzyme-Linked Immunosorbent Assay
  • Gene Knockdown Techniques
  • Gene Regulatory Networks*
  • Humans
  • I-kappa B Proteins
  • Immunoprecipitation
  • Lymphoma, Large B-Cell, Diffuse / genetics
  • Lymphoma, Large B-Cell, Diffuse / metabolism*
  • NF-kappa B / genetics
  • NF-kappa B / metabolism*
  • Nuclear Proteins / metabolism*
  • Polymerase Chain Reaction
  • RNA, Small Interfering
  • Signal Transduction / physiology
  • Transcriptome
  • Transduction, Genetic

Substances

  • Adaptor Proteins, Signal Transducing
  • I-kappa B Proteins
  • NF-kappa B
  • NFKBIZ protein, human
  • Nuclear Proteins
  • RNA, Small Interfering