Abstract
In order to identify membrane proteins whose expression is induced by X-ray irradiation, we developed an antibody (Ab)-directed strategy using a phage Ab library. X-Ray-irradiated cells were screened with a phage Ab library in the presence of a large excess of polyclonal Abs prepared against membrane proteins that are commonly present at the surface of both X-ray-irradiated and nonirradiated cells. After isolation of Ab that bound only to X-ray-irradiated cells, the antigen was identified using MS. Using this approach, we found that expression of LY6D is induced in MCF10A cells by X-ray irradiation. The induction of LY6D expression is triggered through a pathway regulated by ATM, CHK2 and p53. This method is a new Ab-directed proteomic strategy for analysis of membrane proteins, and is applicable to various biological phenomena in situations in which both target molecule-expressing cells and nonexpressing cells are available.
© 2012 The Authors Journal compilation © 2012 FEBS.
Publication types
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Research Support, Non-U.S. Gov't
MeSH terms
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Ataxia Telangiectasia Mutated Proteins
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Base Sequence
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Cell Adhesion Molecules / biosynthesis*
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Cell Adhesion Molecules / genetics
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Cell Adhesion Molecules / immunology
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Cell Cycle Proteins / metabolism
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Cell Line, Tumor
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Checkpoint Kinase 2
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DNA Primers
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DNA-Binding Proteins / metabolism
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GPI-Linked Proteins / biosynthesis
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GPI-Linked Proteins / genetics
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GPI-Linked Proteins / immunology
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Humans
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Mutagens / toxicity
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Protein Serine-Threonine Kinases / metabolism
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Proto-Oncogene Proteins p21(ras) / metabolism
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RNA, Small Interfering
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Real-Time Polymerase Chain Reaction
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Transcription, Genetic
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Tumor Suppressor Protein p53 / metabolism
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Tumor Suppressor Proteins / metabolism
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X-Rays*
Substances
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Cell Adhesion Molecules
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Cell Cycle Proteins
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DNA Primers
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DNA-Binding Proteins
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GPI-Linked Proteins
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LY6D protein, human
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Mutagens
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RNA, Small Interfering
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TP53 protein, human
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Tumor Suppressor Protein p53
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Tumor Suppressor Proteins
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Checkpoint Kinase 2
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ATM protein, human
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Ataxia Telangiectasia Mutated Proteins
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CHEK2 protein, human
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Protein Serine-Threonine Kinases
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Proto-Oncogene Proteins p21(ras)