MicroRNA-target interactions: new insights from genome-wide approaches

Ann N Y Acad Sci. 2012 Oct;1271(1):118-28. doi: 10.1111/j.1749-6632.2012.06745.x.

Abstract

MicroRNAs (miRNAs) are key posttranscriptional regulators of gene expression involved in diverse biological pathways in bilateral animals and plants. The key to understanding the biological function of a miRNA is to identify its regulatory targets. Although a few miRNA targets have been identified genetically, the rapidly expanding list of miRNAs has necessitated genome-wide tools for identifying target mRNAs, and a number of computational and experimental approaches have consequently emerged. Some of these approaches have also provided insights into the mechanistic aspects of miRNA-mediated regulation, another intensely debated area in the miRNA field. Here, we review several emerging features of miRNA-target interactions in animals and genome-wide approaches for probing those interactions.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Computational Biology
  • Down-Regulation
  • Gene Expression Profiling
  • Gene Expression Regulation*
  • Genome-Wide Association Study
  • Humans
  • MicroRNAs / metabolism*
  • Organ Specificity
  • RNA, Messenger / metabolism
  • Species Specificity
  • Up-Regulation

Substances

  • MicroRNAs
  • RNA, Messenger