The human MTHFR rs4846049 polymorphism increases coronary heart disease risk through modifying miRNA binding

Nutr Metab Cardiovasc Dis. 2013 Jul;23(7):693-8. doi: 10.1016/j.numecd.2012.02.009. Epub 2012 May 28.

Abstract

Background and aims: Abnormal functioning of 5,10-methylenetetrahydrofolate reductase (MTHFR) enhances the risk for coronary heart disease (CHD). Here, we tested whether a single-nucleotide polymorphism (SNP) located in the 3' untranslated region (UTR) of MTHFR was associated with CHD susceptibility by affecting microRNAs binding.

Methods and results: We first analyzed in silico the SNPs localized in the 3' UTR of MTHFR for their ability to modify miRNA binding. We observed that rs4846049 (G > T) was a potential candidate SNP to modulate miRNAs:MTHFR mRNA complex, with the greatest changed binding free energy for has-miR-149. Based on luciferase analysis, hsa-miR-149 inhibited the activity of the reporter vector carrying -T allele, but not -G allele. We further conducted a case-control study (654 vs 455) in a Chinese Han population. rs4846049 was significantly associated with increased risk for CHD. In addition, the T allele was associated with decreased levels of HDL-cholesterol and apoA. Finally, we observed a reduced MTHFR protein level in peripheral blood mononuclear cells of CHD patients with TT carriers compared to GG carriers of rs4846049.

Conclusion: Our results suggest that rs4846049 (G > T) of MTHFR is associated with increased risk for CHD. We also identified a potentially pathogenetic mechanism of SNP-modified posttranscriptional gene regulation by miRNAs to MTHFR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions
  • Aged
  • Apolipoproteins A / blood
  • Asian People
  • Case-Control Studies
  • China
  • Cholesterol, HDL / blood
  • Computational Biology
  • Coronary Disease / blood
  • Coronary Disease / genetics*
  • Coronary Disease / metabolism*
  • Down-Regulation
  • Female
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Humans
  • Leukocytes, Mononuclear / metabolism
  • Male
  • Methylenetetrahydrofolate Reductase (NADPH2) / genetics*
  • Methylenetetrahydrofolate Reductase (NADPH2) / metabolism
  • MicroRNAs / metabolism*
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • RNA Processing, Post-Transcriptional
  • RNA, Messenger / metabolism*

Substances

  • 3' Untranslated Regions
  • Apolipoproteins A
  • Cholesterol, HDL
  • MIRN149 microRNA, human
  • MicroRNAs
  • RNA, Messenger
  • MTHFR protein, human
  • Methylenetetrahydrofolate Reductase (NADPH2)