Structural basis for the dual recognition of helical cytokines IL-34 and CSF-1 by CSF-1R

Structure. 2012 Apr 4;20(4):676-87. doi: 10.1016/j.str.2012.02.010. Epub 2012 Apr 3.

Abstract

Lacking any discernible sequence similarity, interleukin-34 (IL-34) and colony stimulating factor 1 (CSF-1) signal through a common receptor CSF-1R on cells of mononuclear phagocyte lineage. Here, the crystal structure of dimeric IL-34 reveals a helical cytokine fold homologous to CSF-1, and we further show that the complex architecture of IL-34 bound to the N-terminal immunoglobulin domains of CSF-1R is similar to the CSF-1/CSF-1R assembly. However, unique conformational adaptations in the receptor domain geometry and intermolecular interface explain the cross-reactivity of CSF-1R for two such distantly related ligands. The docking adaptations of the IL-34 and CSF-1 quaternary complexes, when compared to the stem cell factor assembly, draw a common evolutionary theme for transmembrane signaling. In addition, the structure of IL-34 engaged by a Fab fragment reveals the mechanism of a neutralizing antibody that can help deconvolute IL-34 from CSF-1 biology, with implications for therapeutic intervention in diseases with myeloid pathogenic mechanisms.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Antibodies, Neutralizing / chemistry*
  • Baculoviridae
  • Binding Sites
  • Crystallography, X-Ray
  • Humans
  • Immunoglobulin Fab Fragments / chemistry
  • Interleukins / antagonists & inhibitors
  • Interleukins / chemistry*
  • Interleukins / genetics
  • Kinetics
  • Leukocytes, Mononuclear / cytology
  • Leukocytes, Mononuclear / metabolism
  • Macrophage Colony-Stimulating Factor / chemistry*
  • Macrophage Colony-Stimulating Factor / genetics
  • Models, Molecular
  • Protein Binding
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Proto-Oncogene Proteins c-kit / chemistry
  • Receptor, Macrophage Colony-Stimulating Factor / chemistry*
  • Receptor, Macrophage Colony-Stimulating Factor / genetics
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Signal Transduction / genetics
  • Stem Cell Factor / chemistry
  • Structural Homology, Protein*
  • Thermodynamics

Substances

  • Antibodies, Neutralizing
  • IL34 protein, human
  • Immunoglobulin Fab Fragments
  • Interleukins
  • Recombinant Proteins
  • Stem Cell Factor
  • Macrophage Colony-Stimulating Factor
  • Proto-Oncogene Proteins c-kit
  • Receptor, Macrophage Colony-Stimulating Factor

Associated data

  • PDB/4DKC
  • PDB/4DKD
  • PDB/4DKE
  • PDB/4DKF