CdSe/ZnS core shell quantum dot-based FRET binary oligonucleotide probes for detection of nucleic acids

Photochem Photobiol Sci. 2012 Jun;11(6):881-4. doi: 10.1039/c1pp05132f. Epub 2011 Aug 26.

Abstract

We report the design, synthesis, and characterization of a binary oligonucleotideprobe for selective DNA or RNA detection. The probe is based on fluorescence resonance energy transfer (FRET) from quantum dot (CdSe/ZnS core shell) DNA conjugates to organic dye (cyanine-5) DNA conjugates. Selective hybridization of the donor/acceptor DNA conjugates to target DNA enhances FRET and a change in fluorescence signature was observed.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Cadmium Compounds / chemistry
  • Carbocyanines / chemistry
  • DNA / analysis*
  • Fluorescence Resonance Energy Transfer*
  • Nucleic Acid Hybridization
  • Oligonucleotide Probes / chemical synthesis
  • Oligonucleotide Probes / chemistry*
  • Quantum Dots*
  • Selenium Compounds / chemistry
  • Sulfides / chemistry
  • Zinc Compounds / chemistry

Substances

  • Cadmium Compounds
  • Carbocyanines
  • Oligonucleotide Probes
  • Selenium Compounds
  • Sulfides
  • Zinc Compounds
  • cyanine dye 5
  • DNA
  • cadmium selenide
  • zinc sulfide