Assignments of backbone ¹H, ¹³C and ¹⁵N resonances in H-Ras (1-166) complexed with GppNHp at physiological pH

Biomol NMR Assign. 2012 Apr;6(1):91-3. doi: 10.1007/s12104-011-9332-3. Epub 2011 Aug 4.

Abstract

The small GTPase Ras is an important signaling molecule acting as a molecular switch in eukaryotic cells. Recent findings of global conformational exchange and a putative allosteric binding site in the G domain of Ras opened an avenue to understanding novel aspects of Ras function. To facilitate detailed NMR studies of Ras in physiological solution conditions, we performed backbone resonance assignments of Ras bound to slowly hydrolysable GTP mimic, guanosine 5'-[ß, γ-imido]triphosphate at pH 7.2. Out of 163 non-proline residues of the G domain, signals from backbone amide proton, nitrogen and carbon spins of 127 residues were confidently assigned with the remaining unassigned residues mostly located at the exchange-broadened effectors interface.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Guanylyl Imidodiphosphate / metabolism*
  • Hydrogen-Ion Concentration
  • Nuclear Magnetic Resonance, Biomolecular*
  • Protein Binding
  • Protein Structure, Tertiary
  • Proto-Oncogene Proteins p21(ras) / chemistry*
  • Proto-Oncogene Proteins p21(ras) / metabolism*

Substances

  • Guanylyl Imidodiphosphate
  • Proto-Oncogene Proteins p21(ras)