Automatic segmentation of the breast and axillary region is an important preprocessing step for automatic lesion detection in breast MR and dynamic contrast-enhanced-MR studies. In this paper, we present a fully automatic procedure based on the detection of the upper border of the pectoral muscle. Compared with previous methods based on thresholding, this method is more robust to noise and field inhomogeneities. The method was quantitatively evaluated on 31 cases acquired from two centers by comparing the results with a manual segmentation. Results indicate good overall agreement within the reference segmentation (overlap=0.79 ± 0.09, recall=0.95 ± 0.02, precision=0.82 ± 0.1).