Alternating one-letter symbols for the representation of codon variations at the level of amino acid sequences

Acta Vet Hung. 1990;38(4):285-6.

Abstract

An idea is presented to use different letter types (e.g. L. 1, L, 1, L, l) for the alternating triplets coding the same amino acids. Such compact and demonstrative amino acid sequence comparisons can make easy the identification of differences at the DNA level if not seen in amino acid sequences (e.g. for choosing specific or non-specific primers for polymerase chain reaction).

MeSH terms

  • Amino Acid Sequence*
  • Base Sequence
  • Codon / chemistry*
  • DNA / chemistry*
  • Sequence Homology, Nucleic Acid

Substances

  • Codon
  • DNA