Improved detection of HIV-1 envelope sequences using optimized PCR and inosine-substituted primers

Mol Cell Probes. 1991 Apr;5(2):157-60. doi: 10.1016/0890-8508(91)90011-8.

Abstract

We describe inosine-substituted 'consensus' primers for the detection of HIV-1 envelope sequences by the polymerase chain reaction. The primers, modifications of SK68 and SK69, are highly specific (100%) and sensitive (greater than 94%) and they prevent false-negative results due to variation in the HIV-1 genome. Consensus primers are needed to ensure the detection of most, if not all, variants of HIV-1 including American, African and newly emerging strains.

MeSH terms

  • AIDS-Related Complex / microbiology
  • Base Sequence
  • Child
  • Child, Preschool
  • DNA, Viral / blood*
  • HIV Infections / microbiology
  • HIV Seropositivity / microbiology
  • HIV-1 / genetics*
  • Homosexuality
  • Humans
  • Infant
  • Infant, Newborn
  • Inosine*
  • Male
  • Molecular Sequence Data
  • Polymerase Chain Reaction*
  • Viral Envelope Proteins / genetics*

Substances

  • DNA, Viral
  • Viral Envelope Proteins
  • Inosine