Rapid detection of Pseudomonas aeruginosa in mouse feces by colorimetric loop-mediated isothermal amplification

J Microbiol Methods. 2010 Jun;81(3):247-52. doi: 10.1016/j.mimet.2010.03.008. Epub 2010 Mar 16.

Abstract

A colorimetric loop-mediated isothermal amplification (LAMP) assay with hydroxy naphthol blue was designed to amplify a region in the outer membrane lipoprotein (oprL) gene of Pseudomonas aeruginosa. The LAMP assay showed 100% specificity for the serogroup and other bacteria, and the sensitivity was 10-fold higher than that of the PCR assays. The LAMP assay could detect P. aeruginosa inoculated in mouse feces at 130 colony-forming units (CFU)/0.1g feces (3.25 CFU/reaction). The assay was completed within 2h from DNA extraction. In a field trial, the LAMP assay revealed that none of the 27 samples was obtained from 2 specific pathogen-free (SPF) mouse facilities that were monitoring infection with P. aeruginosa; 1 out of 12 samples from an SPF mouse facility that was not monitoring infection with P. aeruginosa and 2 out of 7 samples from a conventional mouse facility were positive for P. aeruginosa. In contrast, P. aeruginosa was not detected in any of the samples by a conventional culture assay. Thus, this colorimetric LAMP assay is a simple and rapid method for P. aeruginosa detection.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacterial Outer Membrane Proteins / genetics
  • Bacteriological Techniques / methods*
  • Colorimetry / methods
  • Feces / microbiology*
  • Mice
  • Naphthalenesulfonates
  • Nucleic Acid Amplification Techniques / methods*
  • Pseudomonas Infections / veterinary
  • Pseudomonas aeruginosa / isolation & purification*
  • Sensitivity and Specificity
  • Staining and Labeling / methods

Substances

  • Bacterial Outer Membrane Proteins
  • Naphthalenesulfonates
  • trisodium 3-hydroxy-4-((2Z)-2-(2-oxo-4-sulfonatonaphthalen-1-ylidene)hydrazinyl)naphthalene-2,7-disulfonate