Comparative analysis of nucleotide sequences of the partial envelope gene (5' domain) among human T lymphotropic virus type I (HTLV-I) isolates

Virology. 1991 May;182(1):413-9. doi: 10.1016/0042-6822(91)90692-5.

Abstract

Human T-cell lymphotropic virus type I (HTLV-I) is associated with adult T-cell leukemia/lymphoma (ATL) and HTLV-I-associated myelopathy/tropical spastic paraparesis (HAM/TSP). The nucleotide sequences of 640 bp of the proviral genome (positions 5158-5797) derived from 11 HTLV-I-infected persons were analyzed using the polymerase chain reaction and M13-based sequencing techniques. Patterns of single nucleotide substitutions were characterized from the extracellular domain of the envelope gene (gp46). Compared with other retroviruses, the nucleotide sequences of the HTLV-I external envelope gene are highly conserved among the genotypes studied. We found no evidence of dual infections with HTLV-II among the seropositive asymptomatic persons or in patients with either ATL or HAM/TSP. No unique sequence differences were observed in the envelope gene of the HTLV-I isolates derived from patients coinfected with human immunodeficiency virus type 1 (HIV-1). However, comparative analysis of these data and other published HTLV-I envelope sequences indicated the presence of four subtypes of HTLV-I in relation to their geographic origin.

Publication types

  • Comparative Study

MeSH terms

  • Base Sequence
  • Genes, env*
  • HTLV-I Infections / microbiology*
  • Human T-lymphotropic virus 1 / genetics*
  • Humans
  • Molecular Sequence Data
  • Oligonucleotides / chemistry
  • Polymerase Chain Reaction
  • Sequence Homology, Nucleic Acid

Substances

  • Oligonucleotides

Associated data

  • GENBANK/M61048
  • GENBANK/M61049
  • GENBANK/M61050
  • GENBANK/M61051
  • GENBANK/M61052
  • GENBANK/M61053
  • GENBANK/M61054
  • GENBANK/M61055
  • GENBANK/M61056
  • GENBANK/M61057