Ureide catabolism in Arabidopsis thaliana and Escherichia coli

Nat Chem Biol. 2010 Jan;6(1):19-21. doi: 10.1038/nchembio.265. Epub 2009 Nov 22.

Abstract

The availability of whole genome sequences boosts the identification of biochemical pathways conserved across species using tools of comparative genomics. A cross-organism protein association analysis allowed us to identify two enzymes, ureidoglycine aminohydrolase and ureidoglycolate amidohydrolase, that catalyze the final reactions of purine degradation in the model plant Arabidopsis thaliana. A similar pathway was found in Escherichia coli, while an alternative metabolic route via ureidoglycine transaminase can be predicted for other organisms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allantoin / chemistry
  • Amidine-Lyases / chemistry*
  • Aminohydrolases / chemistry*
  • Arabidopsis / metabolism*
  • Arabidopsis Proteins / chemistry*
  • Catalysis
  • Databases, Protein
  • Escherichia coli / metabolism*
  • Genomics
  • Lyases / chemistry*
  • Magnetic Resonance Spectroscopy
  • Models, Biological
  • Nitrogen / chemistry
  • Proteomics / methods
  • Software
  • Species Specificity

Substances

  • Arabidopsis Proteins
  • Allantoin
  • Aminohydrolases
  • ureidoglycine aminohydrolase, Arabidopsis
  • Lyases
  • Amidine-Lyases
  • ureidoglycollate lyase
  • Nitrogen

Associated data

  • PubChem-Substance/85281222
  • PubChem-Substance/85281223
  • PubChem-Substance/85281224
  • PubChem-Substance/85281225
  • PubChem-Substance/85281226
  • PubChem-Substance/85281227
  • PubChem-Substance/85281228
  • PubChem-Substance/85281229
  • PubChem-Substance/85281230
  • PubChem-Substance/85281231