Abstract
The availability of whole genome sequences boosts the identification of biochemical pathways conserved across species using tools of comparative genomics. A cross-organism protein association analysis allowed us to identify two enzymes, ureidoglycine aminohydrolase and ureidoglycolate amidohydrolase, that catalyze the final reactions of purine degradation in the model plant Arabidopsis thaliana. A similar pathway was found in Escherichia coli, while an alternative metabolic route via ureidoglycine transaminase can be predicted for other organisms.
Publication types
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Research Support, Non-U.S. Gov't
MeSH terms
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Allantoin / chemistry
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Amidine-Lyases / chemistry*
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Aminohydrolases / chemistry*
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Arabidopsis / metabolism*
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Arabidopsis Proteins / chemistry*
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Catalysis
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Databases, Protein
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Escherichia coli / metabolism*
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Genomics
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Lyases / chemistry*
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Magnetic Resonance Spectroscopy
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Models, Biological
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Nitrogen / chemistry
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Proteomics / methods
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Software
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Species Specificity
Substances
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Arabidopsis Proteins
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Allantoin
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Aminohydrolases
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ureidoglycine aminohydrolase, Arabidopsis
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Lyases
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Amidine-Lyases
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ureidoglycollate lyase
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Nitrogen
Associated data
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PubChem-Substance/85281222
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PubChem-Substance/85281223
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PubChem-Substance/85281224
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PubChem-Substance/85281225
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PubChem-Substance/85281226
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PubChem-Substance/85281227
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PubChem-Substance/85281228
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PubChem-Substance/85281229
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PubChem-Substance/85281230
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PubChem-Substance/85281231