Distribution of G (VP7) and P (VP4) genotypes of group A bovine rotaviruses from Turkish calves with diarrhea, 1997-2008

Vet Microbiol. 2010 Mar 24;141(3-4):231-7. doi: 10.1016/j.vetmic.2009.09.016. Epub 2009 Sep 26.

Abstract

Group A rotaviruses are major enteric pathogens of calves. In order to investigate the genetic diversity of bovine rotaviruses (BRVs), a collection of 53 BRVs, detected from diarrheic calves from several Turkish geographical areas, between 1997 and 2008 was analyzed by RT-PCR for specificities of the outer capsid proteins VP7 (G type) and VP4 (P type), for the first time. Overall, G6 was the predominant G type, detected in 40/53 samples (75.4%), while P[11] was the predominant P type, detected in 52/53 samples (98.1%). The most common VP7/VP4 combinations were G6P[11] (60.3%) and G10P[11] (24.5%). Mixed infections were identified in 7/53 samples (13.2%). In the VP7 region the G6P[11] viruses were similar to other ones detected worldwide, forming an independent G6 lineage, distantly related to the G6 gene of the vaccine G6P[1] strain NCDV (90.1% amino acid identity), and suggesting that G6P[11] viruses represent a genetically stable BRV strain. The study of G and P type diversity is pivotal to understand the efficacy of the existing rotavirus vaccines and to provide the basis of future prophylaxis tools against rotaviral diarrhea of calves.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antigens, Viral / genetics*
  • Capsid Proteins / genetics*
  • Cattle
  • Cattle Diseases / virology*
  • Diarrhea / etiology*
  • Feces / virology
  • Genetic Variation*
  • Genotype
  • Molecular Sequence Data
  • Phylogeny
  • Polymerase Chain Reaction
  • Rotavirus / genetics*
  • Rotavirus / isolation & purification
  • Rotavirus Infections / complications
  • Rotavirus Infections / veterinary*
  • Rotavirus Infections / virology
  • Turkey

Substances

  • Antigens, Viral
  • Capsid Proteins
  • VP4 protein, Rotavirus
  • VP7 protein, Rotavirus

Associated data

  • GENBANK/FJ878797
  • GENBANK/FJ878798
  • GENBANK/FJ878799
  • GENBANK/FJ878800