High-throughput microarray profiling of cell wall polymers during hydrothermal pre-treatment of wheat straw

Biotechnol Bioeng. 2010 Feb 15;105(3):509-14. doi: 10.1002/bit.22546.

Abstract

Lignocellulosic plant material is potentially a sustainable source of fermentable sugars for bioethanol production. However, a barrier to this is the high resistance or recalcitrance of plant cell walls to be hydrolyzed. Therefore, a detailed knowledge of the structural features of plant cell walls that contribute to recalcitrance is important for improving the efficiency of bioethanol production. In this work we have used a technique known as Comprehensive Microarray Polymer Profiling (CoMPP) to analyze wheat straw before and after being subjected to hydrothermal pre-treatments at four different temperatures. The CoMPP technique combines the specificity of monoclonal antibodies with the high-throughput capacity of microarrays. Changes in the relative abundance of cell wall polysaccharides could be tracked during processing, and a reduction in xylan, arabinoxylans, xyloglucan, and mixed-linked glucan epitopes was detected at the two highest temperatures of pre-treatment used. This work demonstrates the potential of CoMPP as a complementally technique to conventional methods for analyzing biomass composition.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Monoclonal / immunology
  • Biotechnology / methods*
  • Cell Wall / chemistry*
  • Hot Temperature
  • Plant Stems / chemistry*
  • Polysaccharides / analysis*
  • Staining and Labeling / methods
  • Triticum / chemistry*

Substances

  • Antibodies, Monoclonal
  • Polysaccharides