The CaMV transactivator/viroplasmin interferes with RDR6-dependent trans-acting and secondary siRNA pathways in Arabidopsis

Nucleic Acids Res. 2008 Oct;36(18):5896-909. doi: 10.1093/nar/gkn590. Epub 2008 Sep 18.

Abstract

Several RNA silencing pathways in plants restrict viral infections and are suppressed by distinct viral proteins. Here we show that the endogenous trans-acting (ta)siRNA pathway, which depends on Dicer-like (DCL) 4 and RNA-dependent RNA polymerase (RDR) 6, is suppressed by infection of Arabidopsis with Cauliflower mosaic virus (CaMV). This effect was associated with overaccumulation of unprocessed, RDR6-dependent precursors of tasiRNAs and is due solely to expression of the CaMV transactivator/viroplasmin (TAV) protein. TAV expression also impaired secondary, but not primary, siRNA production from a silenced transgene and increased accumulation of mRNAs normally silenced by the four known tasiRNA families and RDR6-dependent secondary siRNAs. Moreover, TAV expression upregulated DCL4, DRB4 and AGO7 that mediate tasiRNA biogenesis. Our findings suggest that TAV is a general inhibitor of silencing amplification that impairs DCL4-mediated processing of RDR6-dependent double-stranded RNA to siRNAs. The resulting deficiency in tasiRNAs and other RDR6-/DCL4-dependent siRNAs appears to trigger a feedback mechanism that compensates for the inhibitory effects.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / genetics*
  • Arabidopsis / metabolism
  • Arabidopsis / virology*
  • Arabidopsis Proteins / antagonists & inhibitors*
  • Caulimovirus / metabolism
  • RNA Interference*
  • RNA Precursors / biosynthesis
  • RNA, Double-Stranded / biosynthesis
  • RNA, Small Interfering / biosynthesis*
  • RNA, Small Interfering / chemistry
  • RNA-Dependent RNA Polymerase / antagonists & inhibitors*
  • Ribonuclease III
  • Ribonucleases / metabolism
  • Trans-Activators / metabolism*
  • Transgenes
  • Viral Proteins / metabolism*

Substances

  • Arabidopsis Proteins
  • RNA Precursors
  • RNA, Double-Stranded
  • RNA, Small Interfering
  • Trans-Activators
  • Viral Proteins
  • gene VI protein, Cauliflower mosaic virus
  • viroplasmin protein, Cauliflower mosaic virus
  • RDR6 protein, Arabidopsis
  • RNA-Dependent RNA Polymerase
  • DCL4 protein, Arabidopsis
  • Ribonucleases
  • Ribonuclease III