Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells

J Cell Biol. 2008 Jul 14;182(1):89-101. doi: 10.1083/jcb.200801196.

Abstract

Deadenylation is the major step triggering mammalian mRNA decay. One consequence of deadenylation is the formation of nontranslatable messenger RNA (mRNA) protein complexes (messenger ribonucleoproteins [mRNPs]). Nontranslatable mRNPs may accumulate in P-bodies, which contain factors involved in translation repression, decapping, and 5'-to-3' degradation. We demonstrate that deadenylation is required for mammalian P-body formation and mRNA decay. We identify Pan2, Pan3, and Caf1 deadenylases as new P-body components and show that Pan3 helps recruit Pan2, Ccr4, and Caf1 to P-bodies. Pan3 knockdown causes a reduction of P-bodies and has differential effects on mRNA decay. Knocking down Caf1 or overexpressing a Caf1 catalytically inactive mutant impairs deadenylation and mRNA decay. P-bodies are not detected when deadenylation is blocked and are restored when the blockage is released. When deadenylation is impaired, P-body formation is not restorable, even when mRNAs exit the translating pool. These results support a dynamic interplay among deadenylation, mRNP remodeling, and P-body formation in selective decay of mammalian mRNA.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cytoplasmic Structures / drug effects
  • Cytoplasmic Structures / metabolism*
  • Exoribonucleases
  • Humans
  • Mice
  • Models, Biological
  • Multiprotein Complexes / metabolism
  • NIH 3T3 Cells
  • Poly A / metabolism
  • Polyadenylation* / drug effects
  • Protein Binding / drug effects
  • Protein Transport / drug effects
  • Proteins / metabolism
  • Puromycin / pharmacology
  • RNA Stability* / drug effects
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Receptors, CCR4 / metabolism
  • Repressor Proteins
  • Ribonucleases

Substances

  • Ccr4 protein, mouse
  • Multiprotein Complexes
  • Proteins
  • RNA, Messenger
  • Receptors, CCR4
  • Repressor Proteins
  • Poly A
  • Puromycin
  • Cnot7 protein, mouse
  • Exoribonucleases
  • Ribonucleases