Analysis of lolB gene sequence and its use in the development of a PCR assay for the detection of Vibrio cholerae

J Microbiol Methods. 2008 Sep;75(1):142-4. doi: 10.1016/j.mimet.2008.05.001. Epub 2008 May 15.

Abstract

A PCR assay has been developed based on a lolB (hemM) gene, which was found to be highly conserved among the Vibrio cholerae species but non-conserved among the other enteric bacteria. The lolB PCR detected all O1, O139 and non-O1/non-O139 serogroup and biotypes of V. cholerae. The analytical specificity of this assay was 100% while the analytical sensitivity was 10 pg/microL and 10(3) CFU/mL at DNA and bacterial level respectively. The diagnostic sensitivity and specificity was 98.5% and 100% respectively.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics*
  • Coproporphyrinogen Oxidase / genetics*
  • DNA, Bacterial / genetics
  • Gram-Negative Bacteria / genetics
  • Gram-Negative Bacteria / isolation & purification
  • Gram-Negative Bacterial Infections / microbiology
  • Humans
  • Polymerase Chain Reaction / methods*
  • Sensitivity and Specificity
  • Vibrio Infections / microbiology*
  • Vibrio cholerae / genetics*
  • Vibrio cholerae / isolation & purification*

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • HemN protein, Bacteria
  • Coproporphyrinogen Oxidase