Origins of barriers and barrierless folding in BBL

Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):118-23. doi: 10.1073/pnas.0709376104. Epub 2008 Jan 2.

Abstract

In contrast to classical chemical phenomenology, theory suggests that proteins may undergo downhill folding without an activation barrier under certain thermodynamic conditions. Recently, the BBL protein was proposed to fold by such a downhill scenario, but discrepancies between experimental results found in different groups argue against this. After briefly reviewing the major experimental studies of the BBL folding mechanism, we show that simulations of both coarse-grained and atomistic models can reconcile the seemingly conflicting observations.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Acyltransferases / chemistry*
  • Acyltransferases / metabolism
  • Amino Acid Sequence
  • Biochemistry / methods*
  • Escherichia coli / metabolism*
  • Hydrogen-Ion Concentration
  • Magnetic Resonance Spectroscopy / methods
  • Models, Theoretical
  • Molecular Conformation
  • Molecular Sequence Data
  • Protein Conformation
  • Protein Folding
  • Protein Structure, Secondary
  • Static Electricity
  • Temperature
  • Thermodynamics

Substances

  • Acyltransferases
  • dihydrolipoamide succinyltransferase