A PAX6 gene polymorphism is associated with genetic predisposition to extreme myopia

Eye (Lond). 2008 Apr;22(4):576-81. doi: 10.1038/sj.eye.6702982. Epub 2007 Oct 19.

Abstract

Purpose: The PAX6 gene is a homeobox gene involved in oculogenesis, ocular growth, and form-deprivation myopia. Our aim was to determine whether PAX6polymorphism at position -12 of intron 9 (IVS9-12C to T, rs667773) is associated with high myopia in Chinese Taiwanese.

Methods: This case-control study compared a study group (n=188) with high myopia whose spherical equivalent was greater than -6.0 D with a control group (n=85) whose spherical equivalent was less than -0.5 D. Genotyping of IVS9-12C to T was conducted by restriction fragment length polymorphism analysis, and results were compared for the two groups.

Results: No significant difference in genotype and allelic frequency at this position between the study and control groups was detected. However, there was a significantly higher frequency of the CC genotype in extremely myopic (greater than -10 D) patients (P<0.001, odds ratio (OR=5.265), confidence interval (CI=2.0342-13.626)). Furthermore, there was a higher frequency of the C allele in the extreme myopia group than in the control group (P=0.002, OR=3.73, CI=1.57-8.81).

Conclusions: The elevated frequency of the CC genotype within the extreme myopia group indicated that the CC genotype could act as a genetic marker, identifying patients predisposed to develop extreme myopia. Varied expression of this genotype may contribute to the genetic predisposition to high myopia in Chinese Taiwanese.

MeSH terms

  • Adolescent
  • Adult
  • Base Sequence
  • Case-Control Studies
  • Eye Proteins / genetics*
  • Female
  • Gene Frequency
  • Genetic Markers
  • Genetic Predisposition to Disease
  • Genotype
  • Homeodomain Proteins / genetics*
  • Humans
  • Male
  • Myopia / genetics*
  • PAX6 Transcription Factor
  • Paired Box Transcription Factors / genetics*
  • Polymorphism, Restriction Fragment Length
  • Polymorphism, Single Nucleotide*
  • Repressor Proteins / genetics*

Substances

  • Eye Proteins
  • Genetic Markers
  • Homeodomain Proteins
  • PAX6 Transcription Factor
  • PAX6 protein, human
  • Paired Box Transcription Factors
  • Repressor Proteins