Flavobacterium filum sp. nov., isolated from a wastewater treatment plant in Korea

Int J Syst Evol Microbiol. 2007 Sep;57(Pt 9):2026-2030. doi: 10.1099/ijs.0.65138-0.

Abstract

A Gram-negative bacterium, designated strain EMB34(T), was isolated from a wastewater treatment plant in Korea. Growth was observed between 10 and 40 degrees C (optimum, 25-35 degrees C) and between pH 6.0 and 9.5 (optimum, pH 7.5-8.0). The cells were non-motile rods, linked with extracellular fibrils. The predominant fatty acids of strain EMB34(T) were iso-C(15 : 0), C(15 : 0), iso-C(15 : 1) G, iso-C(16 : 0) 3-OH and iso-C(15 : 0) 3-OH and the strain contained phosphatidylethanolamine and phosphatidylinositol as the polar lipids. The G+C content of the genomic DNA was 34.2 mol% and the major quinone was menaquinone-6. Comparative 16S rRNA gene sequence analyses showed that strain EMB34(T) formed a distinct phyletic line within the genus Flavobacterium. The levels of 16S rRNA gene sequence similarity with other Flavobacterium species were less than 94.5 %. On the basis of phenotypic, chemotaxonomic and molecular data, it is clear that strain EMB34(T) represents a novel species within the genus Flavobacterium, for which the name Flavobacterium filum sp. nov. is proposed. The type strain is EMB34(T) (=KCTC 12610(T)=DSM 17961(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Flavobacterium / classification*
  • Flavobacterium / genetics
  • Flavobacterium / isolation & purification*
  • Flavobacterium / physiology
  • Genes, rRNA
  • Hydrogen-Ion Concentration
  • Korea
  • Molecular Sequence Data
  • Phospholipids / analysis
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Temperature
  • Water Microbiology*
  • Water Purification

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Phospholipids
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ372981