High-throughput analysis of spatio-temporal dynamics in Dictyostelium

Genome Biol. 2007;8(7):R144. doi: 10.1186/gb-2007-8-7-r144.

Abstract

We demonstrate a time-lapse video approach that allows rapid examination of the spatio-temporal dynamics of Dictyostelium cell populations. Quantitative information was gathered by sampling life histories of more than 2,000 mutant clones from a large mutagenesis collection. Approximately 4% of the clonal lines showed a mutant phenotype at one stage. Many of these could be ordered by clustering into functional groups. The dataset allows one to search and retrieve movies on a gene-by-gene and phenotype-by-phenotype basis.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Dictyostelium / cytology*
  • Dictyostelium / genetics
  • Dictyostelium / growth & development
  • Microscopy, Video / methods*
  • Mutation
  • Phenotype