Utilization of RNA polymerase I promoter and terminator sequences to develop a DNA transfection system for the study of hepatitis C virus internal ribosomal entry site-dependent translation

J Clin Virol. 2007 Sep;40(1):55-9. doi: 10.1016/j.jcv.2007.06.001. Epub 2007 Jul 13.

Abstract

Background: Hepatitis C virus (HCV) causes severe liver diseases in a large population worldwide. HCV protein translation is controlled by an internal ribosomal entry site (IRES) within the 5'-untranslated region (UTR). HCV IRES-dependent translation is critical for HCV-associated pathogenesis.

Objective: To develop a plasmid DNA transfection system by using RNA polymerase I promoter and terminator sequences for studying HCV IRES-dependent translation.

Study design: A gene cassette containing HCV 5'-UTR, Renilla luciferase reporter gene, and HCV 3'-UTR was inserted between RNA polymerase I promoter and terminator sequences. HCV IRES-directed translation was determined by luciferase assay after transfection.

Results: Transfection of the RNA polymerase I-HCV IRES plasmid into human hepatoma Huh-7 and HepG2 cells resulted in luciferase gene expression. Deletion of the IIIf domain in HCV IRES dramatically reduced luciferase activity.

Conclusion: Our results indicated that the plasmid vector system-based on RNA polymerase I promoter and terminator sequences represents an effective approach for the study of HCV IRES-dependent translation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions*
  • Hepacivirus / genetics*
  • Hepacivirus / metabolism
  • Humans
  • Luciferases
  • Plasmids / genetics
  • Promoter Regions, Genetic
  • Protein Biosynthesis*
  • RNA Polymerase I / genetics*
  • RNA Polymerase I / metabolism
  • RNA, Viral
  • Ribosomes / genetics
  • Ribosomes / metabolism*
  • Terminator Regions, Genetic
  • Transfection*

Substances

  • 5' Untranslated Regions
  • RNA, Viral
  • Luciferases
  • RNA Polymerase I